Furnace Control

Where do I hook up the furnace thermostat to the hot water heater?

I have a Amtrol BoilerMate indirect hot water heater. I'm not sure where I'm supposed to hook up the wire from the thermostat. I've already messed up and ruined the control module in my furnace. I found a diagram for the hot water heater saying that the orange wires are for T-T. I'm assuming thats for the thermostat? Anyone know? But there are 2 orange wires and the wire from the thermostat is a red and white wire held together with a brown plastic coating. So is that where I hook it up? and if so does it matter which orange goes to which one because theres no difference. I could probably take the smart control apart more and see if it says anything where the orange wires connect to the microchip. Please help if possible. I'd really hate to ruin another furnace control module and out myself another 200. Thanks
Calling a plumber is my next step.

It's a very simple set up. The t-stat is simple and the control board is simple. I have no answers for you but I'll tell you what you did wrong. You hot wired the transformer to the control board. I don't know how you did it, I wasn't there, but that's what you did. I've done it before myself. If you could provide a control schematic I could probably help. You really need someone familiar with the particular control circuit you are working with. Might be easier to call a tech.

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